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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015955414.1_cds_XP_016493901.1_83961
CDS Infomation

[gene=LOC107813187] [db_xref=GeneID:107813187] [protein=tyrosyl-DNA phosphodiesterase 1-like isoform X3] [protein_id=XP_016493901.1] [location=join(99261..99284,100506..100691,101192..101458,101588..101752,102433..102493,102888..102964,103051..103308,103711..103800,104440..104451)] [gbkey=CDS]
Sequence

ATGTCCACCTCTTCTCAGGTTCAGGTTGGATTTTTGGTGCCTGTAAGTGATTATTTGGAA
GAGGATGAGAAAAATTCCATACCTAAGATTCCACTTTCAGAAGGGCTTAATTGGGTGGGC
CGCGATTGCATTCCAGTTACTGATAAACGGCTGAGTCGCAAGCATCTTACTGTCACTGCC
ACCTCCACTGGCTCCGCTGATGTCCTCGTGGAAGGAACGAACCCTGTTGTCATAAGATTA
AAGGGTGAGAGAAAGAAGCTTTTGTCTGGAGAGAGGTGGAAAATTGAAAGTGGTGATGTC
ATAGAGTTGATACCTGGCCGTTACCTATTTAAGTATGTTAGCACAGCTCCTAAGGATGAA
ACTTCAACAATCAACAAACAAAAAAGGCCTTTCAGTGAAGAAAGTATTACTGACAAAGGT
CAGATGCATGGTAAGAAGAAAGCTCGAGAAGTCTTTCAAGAGGAAGCTTCAGAAAAGAAC
ATGCTGCACAACAATGGCCAAGAAACAGAAAGCTCTGTGGAGGCGATACACCAGTTTAGG
GTTCCGAAGCGTAAGTTACCGCTCACATTCAGATTAATGAGAGTGCGTGAGCTTCCAGCA
TGGGCAAATACCGAGGCTGTTTCTATTAATGATGTTATTCAGGGGAATGTGCTTGTAGCT
ATCCTTTCGAATTACATGGTGGATATGGATTGGCTACTTTCTGCATGTCCAGCTCTTAAA
CGGATTCCCAATGTTCTCGTCATTCATGGAGAAGGTGATGGTGTCATGGAGCATATGAAG
AGAAGCAAACCGGCAAATTGGATTCTGCACAAACCTTCTTTACCAATTGCGTATGGAACA
CACCATTCAAAAGCCATGATTCTTGTCTATCCAACAGGAGTGAGAGTTATTGTACATACT
GCAAACTTGATCTATGTTGATTGGAATAACAAAAGCCAGGGATTGTGGATGCAAGATTTC
CCATGGAAGGATCAAAACAATTTGGGCAAGGATGGCGGATTTGAAAATGATTTGGTTGAT
TATCTAAGTGTGTTAAAGTGGCCGGAATTTACTGTTAATATACCAGCCTTTGGAAGCTGC
AAGATCAATTCCTTGTTCTTCAAAAGATTTGATTACAGTAGTGCATCGGTCCGAGTTTGA

Peptide Sequence

PEP ID

XP_016493901.1
PEP Infomation

PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform X3 [Nicotiana tabacum]
Sequence

MSTSSQVQVGFLVPVSDYLEEDEKNSIPKIPLSEGLNWVGRDCIPVTDKRLSRKHLTVTA
TSTGSADVLVEGTNPVVIRLKGERKKLLSGERWKIESGDVIELIPGRYLFKYVSTAPKDE
TSTINKQKRPFSEESITDKGQMHGKKKAREVFQEEASEKNMLHNNGQETESSVEAIHQFR
VPKRKLPLTFRLMRVRELPAWANTEAVSINDVIQGNVLVAILSNYMVDMDWLLSACPALK
RIPNVLVIHGEGDGVMEHMKRSKPANWILHKPSLPIAYGTHHSKAMILVYPTGVRVIVHT
ANLIYVDWNNKSQGLWMQDFPWKDQNNLGKDGGFENDLVDYLSVLKWPEFTVNIPAFGSC
KINSLFFKRFDYSSASVRV

Transcript Sequence

Gene sequence data has not been registered.